Genomics AI Agent Skills

MCP server for spatial transcriptomics analysis via natural language Using Claude Code / Codex / OpenCode? Just paste this: Manual installation See Installation Guide for detailed setup including virtual environments and all MCP clients. 60+ methods across 15 categories. Supports 10x Visium, Xenium, Slide-seq v2, MERFISH, seqFISH. MIT License · GitHub · Issues

Search and retrieve biomedical data — genes, variants, clinical trials, articles, drugs, diseases, pathways, proteins, adverse events, pharmacogenomics, and phenotype-disease matching. 15 sources including PubMed, ClinicalTrials.gov, ClinVar, OncoKB, Reactome, UniProt, PharmGKB, OpenFDA, Monarch. Use when asked about gene function, variant pathogenicity, trial matching, drug safety, resistance mechanisms, hereditary syndromes, or literature evidence.